You can uninstall or removes an installed ffmpeg2theora package itself from Debian 9 (Stretch) through the terminal,
$ sudo apt-get remove ffmpeg2theora
If you would like to remove ffmpeg2theora and it's dependent packages which are no longer needed from Ubuntu,
$ sudo apt-get remove --auto-remove ffmpeg2theora
If you use with purge options to ffmpeg2theora package all the configuration and dependent packages will be removed.
$ sudo apt-get purge ffmpeg2theora
If you use purge options along with auto remove, will be removed everything regarding the package, It's really useful when you want to reinstall again.
$ sudo apt-get purge --auto-remove ffmpeg2theora